iPlant Collaborative will unite scientists across disciplines
Cold Spring Harbor, NY — 黑料吃瓜资源 (CSHL) will play a central role in an important new initiative called the iPlant Collaborative, funded by the National Science Foundation (NSF). The Collaborative will define and address 鈥済rand challenge questions鈥� in plant biology that have global implications.
鈥淭he idea is to develop an all-encompassing computer and internet-based infrastructure that will transform the way plant science is done, and that will be accessible, at different levels, by scientists across the disciplines and across the planet,鈥� explained Lincoln Stein, Ph.D., CSHL professor and a co-principal investigator of the Collaborative. 鈥淚n addition, the program will be a valuable resource for students and interested members of the public.鈥�
CSHL and four research universities, led by the University of Arizona, will share a $50 million NSF grant over five years to launch the iPlant Collaborative. It will bring together researchers from every area within plant biology—molecular and cellular biologists, geneticists, genome scientists, as well as experts on ecosystems and biosystem diversityRob Martienssenby building infrastructure through which they can more readily interact and collaborate.
Since research is done in real-time as well as 鈥渙ffline鈥� in conjunction with mathematicians, computer scientists and engineers, informatics experts, and even social scientists, plant biologists can be certain that the tools available through the iPlant network will reflect the latest knowledge. 鈥淭his reflects the way science is done in the 21st century,鈥� says Rob Martienssen, Ph.D., professor and head of plant genetics at CSHL. 鈥淭he days have long passed when it made sense for individual scientists, or individual labs, or even individual institutions, to attack major scientific questions in isolation from the broader community.鈥�
Collaboration across disciplines in pursuit of innovative science—for instance, plant genome experts working side-by-side with mathematicians and statisticians to interpret the results of innovative microarray scans of genomic mutations designed by biosystems engineers—is already the norm in the plant science community and throughout the life sciences.
鈥淏ut,鈥� emphasizes Dr. Stein, whose bioinformatics tools are widely used by genome scientists worldwide, 鈥渢he dimension that is lacking, and which the Collaborative seeks to address, concerns the forging of a functional community, within the discipline and extending to those in computer science, math and other fields, upon whose expertise plant science depends.鈥�
CSHL, through its Dolan DNA Learning Center (DNALC), will collaborate with the project team to embed outreach materials within the iPlant portal, thus tightly linking plant research and education. Such material will include video and audio podcasts to publicize the project and to provide students and teachers a window on the 鈥済rand challenge鈥� development process.
The DNALC will work with plant researchers to develop video interviews and narrated animations that explain the conceptual background and historical development of each 鈥済rand challenge.鈥� The culmination of which will spawn a nationwide program that will train 1,000 science teachers in how to utilize iPlant tools for student projects that support integrative and computational thinking.
鈥淪cience education and public outreach typically begin well after a scientific revolution has settled down into what Thomas Kuhn called normal science. In this project, we want to directly involve students and teachers in this revolutionary period of plant research by providing them with educational interfaces into the same data used by iPlant scientists,鈥� stated David Micklos, Executive Director of the DNALC.
The iPlant Collaborative was formed after a call for proposals in 2006 from the NSF鈥檚 Department of Biological Infrastructure. CSHL will host the Collaborative鈥檚 inaugural meeting, set for April 2008, as well as additional meetings throughout the five-year period of the NSF grant.
鈥淚t鈥檚 an exciting prospect that brings to mind some other forward-looking moments in the recent history of biological research in which CSHL was deeply involved,鈥� said Dr. Martienssen. 鈥淚t was on our campus that the idea for sequencing the first plant genome got off the ground, and where the outlines of what became the Human Genome Project were first sketched. We are hoping that the iPlant Collaborative will also achieve great things.鈥�
Written by: Communications Department | [email protected] | 516-367-8455